nirs.modules.CalculateTotalHb

Untitled

nirs.modules.CalculateTotalHb

This module will add total-hemoglobin and the tissue oxygen index estimates to the data structure. It is noted that this function will accept either nirs.core.Data (time-series) or nirs.core.ChannelStats variable.

Example Usage:

raw = nirs.testing.simData();
 
job = nirs.modules.Resample();
job = nirs.modules.OpticalDensity(job);
job = nirs.modules.BeerLambertLaw(job);
hb = job.run(raw);
hb.probe.link
ans = 32×3 table 
 sourcedetectortype
111‘hbo’
211‘hbr’
321‘hbo’
421‘hbr’
522‘hbo’
622‘hbr’
732‘hbo’
832‘hbr’
933‘hbo’
1033‘hbr’
1143‘hbo’
1243‘hbr’
1344‘hbo’
1444‘hbr’
1554‘hbo’
1654‘hbr’
1755‘hbo’
1855‘hbr’
1965‘hbo’
2065‘hbr’
2166‘hbo’
2266‘hbr’
2376‘hbo’
2476‘hbr’
2577‘hbo’
2677‘hbr’
2787‘hbo’
2887‘hbr’
2988‘hbo’
3088‘hbr’
3198‘hbo’
3298‘hbr’
 
job = nirs.modules.CalculateTotalHb();
hb2 = job.run(hb);
hb2.probe.link
ans = 64×3 table 
 sourcedetectortype
111‘StO2’
211‘hbo’
311‘hbr’
411‘hbt’
521‘StO2’
621‘hbo’
721‘hbr’
821‘hbt’
922‘StO2’
1022‘hbo’
1122‘hbr’
1222‘hbt’
1332‘StO2’
1432‘hbo’
1532‘hbr’
1632‘hbt’
1733‘StO2’
1833‘hbo’
1933‘hbr’
2033‘hbt’
2143‘StO2’
2243‘hbo’
2343‘hbr’
2443‘hbt’
2544‘StO2’
2644‘hbo’
2744‘hbr’
2844‘hbt’
2954‘StO2’
3054‘hbo’
3154‘hbr’
3254‘hbt’
3355‘StO2’
3455‘hbo’
3555‘hbr’
3655‘hbt’
3765‘StO2’
3865‘hbo’
3965‘hbr’
4065‘hbt’
4166‘StO2’
4266‘hbo’
4366‘hbr’
4466‘hbt’
4576‘StO2’
4676‘hbo’
4776‘hbr’
4876‘hbt’
4977‘StO2’
5077‘hbo’
5177‘hbr’
5277‘hbt’
5387‘StO2’
5487‘hbo’
5587‘hbr’
5687‘hbt’
5788‘StO2’
5888‘hbo’
5988‘hbr’
6088‘hbt’
6198‘StO2’
6298‘hbo’
6398‘hbr’
6498‘hbt’

Huppert Lab

AnalyzIR Toolbox

nirs.modules.CalculateTotalHb

nirs.modules.CalculateTotalHb

Leave a Reply Cancel reply

	source	detector	type
1	1	1	‘hbo’
2	1	1	‘hbr’
3	2	1	‘hbo’
4	2	1	‘hbr’
5	2	2	‘hbo’
6	2	2	‘hbr’
7	3	2	‘hbo’
8	3	2	‘hbr’
9	3	3	‘hbo’
10	3	3	‘hbr’
11	4	3	‘hbo’
12	4	3	‘hbr’
13	4	4	‘hbo’
14	4	4	‘hbr’
15	5	4	‘hbo’
16	5	4	‘hbr’
17	5	5	‘hbo’
18	5	5	‘hbr’
19	6	5	‘hbo’
20	6	5	‘hbr’
21	6	6	‘hbo’
22	6	6	‘hbr’
23	7	6	‘hbo’
24	7	6	‘hbr’
25	7	7	‘hbo’
26	7	7	‘hbr’
27	8	7	‘hbo’
28	8	7	‘hbr’
29	8	8	‘hbo’
30	8	8	‘hbr’
31	9	8	‘hbo’
32	9	8	‘hbr’

	source	detector	type
1	1	1	‘StO2’
2	1	1	‘hbo’
3	1	1	‘hbr’
4	1	1	‘hbt’
5	2	1	‘StO2’
6	2	1	‘hbo’
7	2	1	‘hbr’
8	2	1	‘hbt’
9	2	2	‘StO2’
10	2	2	‘hbo’
11	2	2	‘hbr’
12	2	2	‘hbt’
13	3	2	‘StO2’
14	3	2	‘hbo’
15	3	2	‘hbr’
16	3	2	‘hbt’
17	3	3	‘StO2’
18	3	3	‘hbo’
19	3	3	‘hbr’
20	3	3	‘hbt’
21	4	3	‘StO2’
22	4	3	‘hbo’
23	4	3	‘hbr’
24	4	3	‘hbt’
25	4	4	‘StO2’
26	4	4	‘hbo’
27	4	4	‘hbr’
28	4	4	‘hbt’
29	5	4	‘StO2’
30	5	4	‘hbo’
31	5	4	‘hbr’
32	5	4	‘hbt’
33	5	5	‘StO2’
34	5	5	‘hbo’
35	5	5	‘hbr’
36	5	5	‘hbt’
37	6	5	‘StO2’
38	6	5	‘hbo’
39	6	5	‘hbr’
40	6	5	‘hbt’
41	6	6	‘StO2’
42	6	6	‘hbo’
43	6	6	‘hbr’
44	6	6	‘hbt’
45	7	6	‘StO2’
46	7	6	‘hbo’
47	7	6	‘hbr’
48	7	6	‘hbt’
49	7	7	‘StO2’
50	7	7	‘hbo’
51	7	7	‘hbr’
52	7	7	‘hbt’
53	8	7	‘StO2’
54	8	7	‘hbo’
55	8	7	‘hbr’
56	8	7	‘hbt’
57	8	8	‘StO2’
58	8	8	‘hbo’
59	8	8	‘hbr’
60	8	8	‘hbt’
61	9	8	‘StO2’
62	9	8	‘hbo’
63	9	8	‘hbr’
64	9	8	‘hbt’